chr5 : 83,790,404 83,790,808
404 bp 22 TFs 0 linked genes
This 404 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:83,785,404 – 83,795,808
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 11 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 108 bp overlap
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 56 bp overlap
ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 63 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 99 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 172 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 63 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 87 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 73 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 150 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 350 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 94 bp overlap
CDK6 1 dataset
ChIP KB GSE52469.CDK6.KB 110 bp overlap
CTCF 1 dataset
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 55 bp overlap
FOXA1 1 dataset
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 123 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 404 bp overlap
ChIP DE DE-FOXA2-2 348 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 363 bp overlap
ChIP DE DE-GATA4-2 313 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 386 bp overlap
ChIP DE DE-GATA6-2 404 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 331 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 404 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 358 bp overlap
MAFF 1 dataset
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Mafb 1 dataset
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
NR3C1 1 dataset
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 91 bp overlap
NRL 1 dataset
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Rhox11 1 dataset
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 404 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD4 1 dataset
ChIP HGrC1_EV GSE138496.SMAD4.HGrC1_EV 169 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 382 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 248 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 214 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 135 bp overlap