chr5 : 69,233,877 69,234,185
308 bp 15 TFs 1 linked gene
This 308 bp open chromatin element is linked to CDK7 and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CDK7 692 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:69,228,877 – 69,239,185
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP K562 ENCFF092PWQ 279 bp overlap
ESR1 1 dataset
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 68 bp overlap
EZH2 1 dataset
ChIP Jurkat GSE147198.EZH2.Jurkat 126 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 69 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 308 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 207 bp overlap
ChIP DE DE-FOXA2-1 308 bp overlap
ChIP DE DE-FOXA2-2 291 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 72 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 111 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 204 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 204 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 217 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 171 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 153 bp overlap
GATA4 9 datasets
ChIP A-549 GSE85002.GATA4.A-549 237 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 266 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 259 bp overlap
ChIP DE DE-GATA4-1 308 bp overlap
ChIP DE DE-GATA4-2 308 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 305 bp overlap
ChIP foregut GSE117136.GATA4.foregut 308 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 274 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 308 bp overlap
ChIP DE DE-GATA6-2 308 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 142 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 308 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 154 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 308 bp overlap
ChIP foregut GSE117136.GATA6.foregut 252 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 241 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 286 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 223 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 308 bp overlap
PAX8 1 dataset
ChIP GM12878 ENCFF033MGF 118 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 80 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 220 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 200 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 111 bp overlap