chr1 : 87,134,621 87,134,921
300 bp 13 TFs 1 linked gene
This 300 bp open chromatin element is linked to LINC01140 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01140 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:87,129,621 – 87,139,921
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
CTCF 5 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 214 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 69 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 130 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 161 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 190 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 220 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 168 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 167 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 300 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 283 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 285 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 194 bp overlap
POU5F1 1 dataset
ChIP NCCIT GSE36134.POU5F1.NCCIT 90 bp overlap
PPARG 2 datasets
ChIP ASC GSE21366.PPARG.ASC 255 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 214 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 197 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 294 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 232 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 129 bp overlap