chr4 : 186,164,870 – 186,165,480
610 bp 18 TFs 1 linked gene
This 610 bp open chromatin element is linked to RPSAP70 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPSAP70 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:186,159,870 – 186,170,480
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 113 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 240 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 287 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 441 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 393 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 493 bp overlap
ChIP DE DE-GATA4-2 562 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 573 bp overlap
ChIP DE DE-GATA6-2 567 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 500 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 507 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 552 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 605 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 579 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 575 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 576 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 249 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 352 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 308 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 247 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 180 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 595 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 558 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 486 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 532 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 592 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 610 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 610 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 174 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 339 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 332 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 605 bp overlap
ZNF136 1 dataset
ChIP HEK293T GSE78099.ZNF136.HEK293T 287 bp overlap
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