chr4 : 163,171,420 163,172,122
702 bp 18 TFs 1 linked gene
This 702 bp open chromatin element is linked to NAF1 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NAF1 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:163,166,420 – 163,177,122
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 321 bp overlap
GATA1 3 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 72 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 132 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 191 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 124 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 702 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 336 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 305 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 226 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 485 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 702 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 213 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 684 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 153 bp overlap
ChIP K562 ENCFF055GAZ 312 bp overlap
ChIP K562 ENCFF317JJX 324 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 160 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 119 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 138 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 167 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 118 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 329 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 211 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
RELA 1 dataset
ChIP GM12891 ENCSR000EAI.RELA.GM12891 154 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 605 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 565 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 310 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 189 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 156 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 142 bp overlap