chr4 : 155,308,862 – 155,309,475

613 bp 60 TFs 0 linked genes

This 613 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

BARX1 2 datasets

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 2 datasets

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

Bach1::Mafk 1 dataset

Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap

CREB1 1 dataset

Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap

DLX1 2 datasets

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx2 2 datasets

Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 2 datasets

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 2 datasets

Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

EN2 2 datasets

Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

ETV1 1 dataset

Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap

FIGLA 2 datasets

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

ChIP LNCaP GSE52725.FOXA1.LNCaP 136 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 529 bp overlap

ChIP DE DE-FOXA2-2 527 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

Foxl2 1 dataset

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

Foxq1 1 dataset

Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 403 bp overlap

ChIP DE DE-GATA4-2 383 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-1 348 bp overlap

ChIP DE DE-GATA6-2 458 bp overlap

GBX1 2 datasets

Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 2 datasets

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

HOXC11 1 dataset

Motif DE_60h DE_60h-HOXC11_MA0651.3 11 bp overlap

HOXC12 1 dataset

Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap

HOXD11 1 dataset

Motif DE_60h DE_60h-HOXD11_MA0908.2 9 bp overlap

Hoxa11 1 dataset

Motif DE_60h DE_60h-Hoxa11_MA0911.2 9 bp overlap

IKZF1 1 dataset

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1133.2 11 bp overlap

LBX1 2 datasets

Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 2 datasets

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 2 datasets

Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

Lhx1 2 datasets

Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap

Motif DE_60h DE_60h-Lhx1_MA1518.3 10 bp overlap

MAF::NFE2 1 dataset

Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MSX1 2 datasets

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

MYOD1 2 datasets

Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap

Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

Msx3 2 datasets

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NFATC3 1 dataset

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NFYB 4 datasets

Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap

Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap

NR1I3 1 dataset

Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nobox 2 datasets

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

POU2F2 2 datasets

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

PPARA::RXRA 1 dataset

Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap

PRRX2 2 datasets

Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

Prdm15 1 dataset

Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap

Ptf1A 2 datasets

Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap

Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap

RAX 2 datasets

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 327 bp overlap

SNAI2 2 datasets

Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap

Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap

TBX20 1 dataset

Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap

Vdr 1 dataset

Motif DE_60h DE_60h-Vdr_MA0693.4 7 bp overlap

ZEB1 2 datasets

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF175 1 dataset

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF680 1 dataset

Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap