Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

26 transcription factors

ARID1A 1 dataset

ChIP NGP GSE134626.ARID1A.NGP 473 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 182 bp overlap

CTCF 2 datasets

Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap

Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 207 bp overlap

ESR1 6 datasets

ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 333 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 272 bp overlap

ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 153 bp overlap

ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 186 bp overlap

ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 208 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 180 bp overlap

ESR1_Y537C 1 dataset

ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 270 bp overlap

EZH2 1 dataset

ChIP SU-DHL-6 GSE45982.EZH2.SU-DHL-6 136 bp overlap

JUND 2 datasets

Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap

Motif DE_36h DE_36h-JUND_MA0492.2 11 bp overlap

MAX 3 datasets

ChIP P493-6 GSE36354.MAX.P493-6 204 bp overlap

ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 199 bp overlap

ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 170 bp overlap

MED 1 dataset

ChIP SEM GSE83671.MED.SEM 275 bp overlap

MEIS1 3 datasets

ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 163 bp overlap

ChIP SEM GSE38339.MEIS1.SEM 113 bp overlap

ChIP SEM GSE38339.MEIS1.SEM 124 bp overlap

MYC 1 dataset

ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 348 bp overlap

RARA 2 datasets

Motif DE_24h DE_24h-RARA_MA0730.1 17 bp overlap

Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap

RARA::RXRA 2 datasets

Motif DE_24h DE_24h-RARARXRA_MA0159.1 17 bp overlap

Motif DE_36h DE_36h-RARARXRA_MA0159.1 17 bp overlap

RARA::RXRG 2 datasets

Motif DE_24h DE_24h-RARARXRG_MA1149.2 17 bp overlap

Motif DE_36h DE_36h-RARARXRG_MA1149.2 17 bp overlap

REST 3 datasets

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap

Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap

Rarb 2 datasets

Motif DE_24h DE_24h-Rarb_MA0858.1 17 bp overlap

Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap

SMAD2 3 datasets

Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 201 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 179 bp overlap

SMARCA4 2 datasets

ChIP NGP GSE134626.SMARCA4.NGP 140 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 294 bp overlap

ZBTB24 1 dataset

ChIP HCT-116 GSE111683.ZBTB24.HCT-116 174 bp overlap

ZNF778 1 dataset

ChIP HEK293T GSE78099.ZNF778.HEK293T 63 bp overlap

ZNF816 3 datasets

Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap

Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap

Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap

ZSCAN5C 1 dataset

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 181 bp overlap

Genome Browser