chr4 : 89,054,772 89,054,905
133 bp 13 TFs 1 linked gene
This 133 bp open chromatin element is linked to FAM13A and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FAM13A 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:89,049,772 – 89,059,905
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
GATA2 3 datasets
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 83 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 84 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 94 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 114 bp overlap
ChIP DE DE-GATA4-2 78 bp overlap
ChIP foregut GSE117136.GATA4.foregut 76 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 111 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 133 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 50 bp overlap
ChIP DE DE-GATA6-2 79 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 133 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 50 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 67 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 133 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 104 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 119 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 122 bp overlap
ChIP K562 ENCFF771OHZ 83 bp overlap
KMT2A 3 datasets
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 133 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 133 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 133 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 66 bp overlap
REST 3 datasets
ChIP HEK293 ENCSR896UBV.REST.HEK293 133 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 90 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 109 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 59 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 133 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 128 bp overlap