chr4 : 77,123,593 77,124,378
785 bp 24 TFs 3 linked genes
This 785 bp open chromatin element is linked to CCNG2, CCNI, and SEPTIN11 and is bound by 24 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
CCNG2 33.2 kb Distal Multiome
CCNI 48.0 kb Distal Multiome
SEPTIN11 174.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:77,118,593 – 77,129,378
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 266 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 97 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 187 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 381 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 785 bp overlap
ChIP DE DE-FOXA2-2 712 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 720 bp overlap
ChIP DE DE-GATA4-2 785 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 105 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 698 bp overlap
ChIP DE DE-GATA6-2 785 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 611 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 664 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 704 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 602 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 596 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 608 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 228 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 138 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 107 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 90 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 62 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 153 bp overlap
NANOG 4 datasets
ChIP WA01 ERP004238.NANOG.WA01 279 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 524 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 340 bp overlap
ChIP hESC GSE18292.NANOG.hESC 167 bp overlap
SMAD2 3 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 285 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 595 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 597 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 762 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 645 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 455 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 512 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 641 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 771 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 578 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 214 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 359 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 436 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 542 bp overlap
SPI1 11 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 149 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 94 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 65 bp overlap
ChIP GM12878 ENCFF134LCP 172 bp overlap
ChIP GM12891 ENCFF563IUT 131 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 96 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 65 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 76 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 114 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 73 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 61 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 80 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 211 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 118 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 160 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 134 bp overlap