chr4 : 48,493,342 48,493,739
397 bp 17 TFs 2 linked genes
This 397 bp open chromatin element is linked to ZAR1 and SLC10A4 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZAR1 3.1 kb Proximal Proximity
SLC10A4 10.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:48,488,342 – 48,498,739
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 241 bp overlap
CEBPA 5 datasets
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 170 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 89 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 187 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 187 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 61 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 269 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 374 bp overlap
ChIP neural cell ENCFF442QNK 343 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 211 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 397 bp overlap
ChIP DE DE-FOXA2-2 397 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 397 bp overlap
ChIP DE DE-GATA4-2 397 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 397 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 239 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 327 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 190 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 203 bp overlap
ChIP neural cell ENCFF882LXX 279 bp overlap
ChIP neural cell ENCFF882LXX 78 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 128 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 217 bp overlap