chr4 : 47,922,368 47,922,782
414 bp 14 TFs 1 linked gene
This 414 bp open chromatin element is linked to NFXL1 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NFXL1 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:47,917,368 – 47,927,782
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 376 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 211 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 380 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 343 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 316 bp overlap
ChIP DE DE-FOXA2-2 215 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 248 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 119 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 246 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 395 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 346 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 221 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 285 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 314 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap