chr4 : 15,482,474 15,482,819
345 bp 19 TFs 1 linked gene
This 345 bp open chromatin element is linked to CC2D2A and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CC2D2A 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:15,477,474 – 15,487,819
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 103 bp overlap
BRD4 1 dataset
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 345 bp overlap
CREBBP 2 datasets
ChIP retina_Hu15 GSE137311.CREBBP.retina_Hu15 329 bp overlap
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 306 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 247 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 279 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 333 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 288 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 324 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 297 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 197 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 131 bp overlap
ChIP DE DE-GATA4-2 332 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 231 bp overlap
ChIP DE DE-GATA6-2 298 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 342 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 345 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 345 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 345 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 193 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 91 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 345 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 345 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 251 bp overlap
MITF 1 dataset
ChIP 501-mel GSE137522.MITF.501-mel 117 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 190 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 345 bp overlap
RFX1 3 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 106 bp overlap
ChIP K562 ENCFF421AVO 170 bp overlap
ChIP K562 ENCFF809XVG 138 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 340 bp overlap
USF1 2 datasets
ChIP K-562 ENCSR000BKT.USF1.K-562 88 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 78 bp overlap
USF2 1 dataset
ChIP K-562 ENCSR578KEN.USF2.K-562 85 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 142 bp overlap