chr4 : 6,197,469 6,197,705
236 bp 12 TFs 4 linked genes
This 236 bp open chromatin element is linked to 4 target genes and is bound by 12 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
C4orf50 2.8 kb Proximal Proximity
JAKMIP1 2.8 kb Proximal Proximity
ENSG00000290803 3.0 kb Proximal Proximity
ENSG00000251408 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:6,192,469 – 6,202,705
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 236 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 216 bp overlap
EZH2 2 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 236 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 150 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-1 178 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 127 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 140 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 136 bp overlap
POLR2A 2 datasets
ChIP GM12892 ENCFF245LYF 236 bp overlap
ChIP GM12892 ENCFF542ZFO 236 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 78 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 236 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 222 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 66 bp overlap