chr3 : 168,514,284 168,514,523
239 bp 26 TFs 0 linked genes
This 239 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:168,509,284 – 168,519,523
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 239 bp overlap
ARID2 3 datasets
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 225 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 136 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 239 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 133 bp overlap
CTCF 1 dataset
ChIP ID00014 GSE76922.CTCF.ID00014 195 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 144 bp overlap
DPF2 1 dataset
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 239 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 84 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 239 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 155 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 239 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 81 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 167 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 207 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 193 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 239 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 239 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 230 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 239 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 172 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 185 bp overlap
POU5F1 4 datasets
ChIP GM23338 ENCFF333SNB 200 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 239 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 203 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 149 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 72 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 239 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 239 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 145 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 167 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 239 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 134 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 208 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 168 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 124 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 239 bp overlap