chr3 : 167,727,673 167,728,086
413 bp 23 TFs 2 linked genes
This 413 bp open chromatin element is linked to PDCD10 and SERPINI1 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PDCD10 6.4 kb Proximal Proximity
SERPINI1 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:167,722,673 – 167,733,086
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 124 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 181 bp overlap
ESR1 15 datasets
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 157 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 378 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 351 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 178 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 208 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 214 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 304 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 384 bp overlap
ChIP T-47D_E2 GSE72249.ESR1.T-47D_E2 308 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 344 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 292 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 174 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 372 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 245 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 351 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 407 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 90 bp overlap
FOXA1 16 datasets
ChIP T-47D GSE72249.FOXA1.T-47D 273 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 243 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 203 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 272 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 306 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 224 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 268 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 154 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 146 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 238 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 253 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 245 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 386 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 376 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 386 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 277 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 140 bp overlap
ChIP DE DE-FOXA2-1 413 bp overlap
ChIP DE DE-FOXA2-2 413 bp overlap
ChIP HepG2 ENCFF533COJ 295 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 413 bp overlap
ChIP DE DE-GATA4-2 413 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 413 bp overlap
ChIP DE DE-GATA6-2 413 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 134 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 413 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 172 bp overlap
NR2F2 1 dataset
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 160 bp overlap
NR3C1 2 datasets
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 220 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 142 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 264 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 349 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 353 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 338 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 352 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 371 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 211 bp overlap