chr3 : 29,557,962 29,558,135
173 bp 20 TFs 0 linked genes
This 173 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:29,552,962 – 29,563,135
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 173 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 173 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 173 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 173 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 173 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 173 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 116 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 173 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 173 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 173 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 140 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 173 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 173 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 173 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 173 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 138 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 114 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 173 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 173 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RFX5 1 dataset
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 173 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 173 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 173 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 126 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 173 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 173 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 126 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 80 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 80 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap