Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

16 transcription factors

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 306 bp overlap

CDK8 1 dataset

ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 75 bp overlap

CTCF 8 datasets

ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 277 bp overlap

ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 312 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 295 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 339 bp overlap

ChIP endodermal cell ENCFF471YCZ 350 bp overlap

ChIP islet ERP004003.CTCF.islet 159 bp overlap

ChIP neural ENCSR822CEA.CTCF.neural 350 bp overlap

ChIP neural cell ENCFF335ADI 204 bp overlap

EZH2 4 datasets

ChIP H1 ENCFF232NZA 350 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 139 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 350 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 170 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 350 bp overlap

JARID2 1 dataset

ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 203 bp overlap

MED12 1 dataset

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 72 bp overlap

MYC 1 dataset

ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 114 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 120 bp overlap

PDX1 1 dataset

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap

PGR 1 dataset

ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 186 bp overlap

RAD21 3 datasets

ChIP neural ENCSR198ZYJ.RAD21.neural 350 bp overlap

ChIP neural cell ENCFF564MOT 350 bp overlap

ChIP neural cell ENCFF564MOT 262 bp overlap

RARA 1 dataset

ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 214 bp overlap

SMARCA4 1 dataset

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 295 bp overlap

SMC3 3 datasets

ChIP neural ENCSR404BPV.SMC3.neural 349 bp overlap

ChIP neural cell ENCFF795YGY 350 bp overlap

ChIP neural cell ENCFF795YGY 263 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 341 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000288831		2.1 kb	Proximal	Proximity
CNTN4		2.3 kb	Proximal	Proximity

Genome Browser