Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

28 transcription factors

ASCL1 1 dataset

Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap

Crx 2 datasets

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap

Dmbx1 2 datasets

Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap

Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap

FIGLA 1 dataset

Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 255 bp overlap

ChIP DE DE-GATA4-2 145 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 266 bp overlap

ChIP DE DE-GATA6-2 321 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 321 bp overlap

GSC 2 datasets

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap

GSC2 2 datasets

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap

HOXA10 2 datasets

Motif DE_48h DE_48h-HOXA10_MA0899.2 9 bp overlap

Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap

HOXD9 2 datasets

Motif DE_48h DE_48h-HOXD9_MA0913.3 9 bp overlap

Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap

Hnf1A 2 datasets

Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap

Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap

JUN 1 dataset

ChIP DE_D1 S40-DE-d1-JUN-exp2 298 bp overlap

KLF4 2 datasets

Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap

Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap

OTX1 2 datasets

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap

PITX1 2 datasets

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap

PITX3 2 datasets

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap

RHOXF1 2 datasets

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 161 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 228 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 301 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 321 bp overlap

SNAI1 1 dataset

Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 316 bp overlap

SREBF1 4 datasets

Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap

Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap

Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap

Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap

SREBF2 2 datasets

Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap

Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap

TCF12 1 dataset

Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap

Wt1 1 dataset

Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap

ZEB1 1 dataset

Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap

ZNF410 2 datasets

Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap

Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap

ZNF701 2 datasets

Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap

Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap

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