chr2 : 229,825,504 – 229,825,796
292 bp 17 TFs 0 linked genes
This 292 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:229,820,504 – 229,830,796
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CHAMP1 3 datasets
ChIP K-562 ENCSR315NNL.CHAMP1.K-562 194 bp overlap
ChIP K562 ENCFF429USX 274 bp overlap
ChIP K562 ENCFF860ZIW 292 bp overlap
CTCF 116 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 292 bp overlap
ChIP AG04450 ENCFF116DJL 232 bp overlap
ChIP BE2C ENCFF757SRF 265 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 89 bp overlap
ChIP DOHH2 ENCFF637WNW 292 bp overlap
ChIP DOHH2 ENCFF637WNW 237 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 223 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 228 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 163 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 224 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 164 bp overlap
ChIP GM12864 ENCFF357DQE 246 bp overlap
ChIP GM12872 ENCFF697BYI 262 bp overlap
ChIP GM12873 ENCFF711LOS 232 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 111 bp overlap
ChIP GM12874 ENCFF942MTD 243 bp overlap
ChIP GM12875 ENCFF081UCQ 236 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 105 bp overlap
ChIP GM12878 ENCFF217EAX 281 bp overlap
ChIP GM23338 ENCFF531QOI 292 bp overlap
ChIP GM23338 ENCFF832KWE 292 bp overlap
ChIP H9 ENCFF152GTF 212 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 241 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 253 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 164 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 188 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 194 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 178 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 190 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 154 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 278 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 132 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 275 bp overlap
ChIP HCT116 ENCFF003KHP 292 bp overlap
ChIP HEK293 ENCFF498RMM 246 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 167 bp overlap
ChIP HFFc6 ENCFF005CJI 165 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 167 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 224 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 292 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 209 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 151 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 214 bp overlap
ChIP HepG2 ENCFF194VBQ 280 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 112 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 112 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 111 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 115 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 107 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 133 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 97 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 120 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 149 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 156 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 182 bp overlap
ChIP K562 ENCFF082GOI 174 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 155 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 292 bp overlap
ChIP Loucy ENCFF359TVQ 292 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 186 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 199 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 234 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 128 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 244 bp overlap
ChIP PC-3 ENCFF487TUI 292 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 270 bp overlap
ChIP Panc1 ENCFF056JQX 292 bp overlap
ChIP Panc1 ENCFF056JQX 236 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 154 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 272 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 122 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 162 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 292 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 234 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 205 bp overlap
ChIP chondrocyte ENCFF134ORZ 292 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 233 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 292 bp overlap
ChIP endodermal cell ENCFF471YCZ 230 bp overlap
ChIP endothelial cell ENCFF663LIE 292 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 173 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 177 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 105 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 292 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 251 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 173 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 142 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 290 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 235 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 233 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 210 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 116 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 292 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 159 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 292 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 251 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 199 bp overlap
ChIP heart left ventricle ENCFF888ERQ 292 bp overlap
ChIP keratinocyte ENCFF805QIE 292 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 292 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 248 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 292 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 236 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 230 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 252 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 292 bp overlap
ChIP neural crest cell ENCFF182LWK 292 bp overlap
ChIP neural progenitor cell ENCFF420RBO 271 bp overlap
ChIP osteocyte ENCFF929FPD 292 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 292 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 292 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 219 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 149 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 292 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 149 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 197 bp overlap
FLI1 4 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 292 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 292 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 280 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 191 bp overlap
FOS 1 dataset
ChIP endothelial cell of umbilical vein ENCFF415XBG 292 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 258 bp overlap
GATA2 2 datasets
ChIP endothelial cell of umbilical vein ENCFF148NLK 292 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 179 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 292 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 292 bp overlap
ChIP DE DE-GATA6-2 292 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 271 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 137 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 292 bp overlap
RELA 17 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 292 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 270 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 82 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 247 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 218 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 272 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 161 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 249 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 292 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 281 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 209 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 264 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 278 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 292 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 269 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 145 bp overlap
ZSCAN5A 1 dataset
ChIP HepG2 ENCFF633DFI 292 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 166 bp overlap
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