chr2 : 190,177,206 190,177,559
353 bp 18 TFs 1 linked gene
This 353 bp open chromatin element is linked to C2orf88 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
C2orf88 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:190,172,206 – 190,182,559
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 210 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 96 bp overlap
BRD3 3 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 140 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 241 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 261 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 247 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 246 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 208 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 243 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 148 bp overlap
CTCF 13 datasets
ChIP K-562 GSE70482.CTCF.K-562 207 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 207 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 180 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 104 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 165 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 98 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 116 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 111 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 313 bp overlap
ChIP K562 ENCFF598YSU 219 bp overlap
ChIP endodermal cell ENCFF471YCZ 227 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 272 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 74 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 353 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 353 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 108 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 347 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 181 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 157 bp overlap
RAD21 1 dataset
ChIP K-562 ENCSR000BKV.RAD21.K-562 114 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 352 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 353 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 231 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 126 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 210 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 246 bp overlap