chr2 : 170,488,725 170,489,352
627 bp 23 TFs 0 linked genes
This 627 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:170,483,725 – 170,494,352
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 63 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 373 bp overlap
ChIP DE DE-FOXA2-2 614 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 511 bp overlap
ChIP DE DE-GATA4-2 627 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 328 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 390 bp overlap
ChIP DE DE-GATA6-2 589 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 610 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 627 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 551 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 538 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 627 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 627 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 466 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 405 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 174 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 70 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 451 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 627 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 362 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 294 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 374 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 322 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 485 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 114 bp overlap
TCF4 1 dataset
Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap