chr1 : 4,714,909 4,715,283
374 bp 17 TFs 1 linked gene
This 374 bp open chromatin element is linked to AJAP1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
AJAP1 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:4,709,909 – 4,720,283
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 338 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 205 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 367 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 287 bp overlap
CTCF 1 dataset
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 353 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 67 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 217 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 374 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 232 bp overlap
ChIP DE DE-FOXA2-2 304 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 334 bp overlap
ChIP DE DE-GATA4-2 374 bp overlap
ChIP foregut GSE117136.GATA4.foregut 361 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 298 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 374 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 342 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 335 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 374 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 374 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 374 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 352 bp overlap
ChIP foregut GSE117136.GATA6.foregut 349 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 374 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 276 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 234 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 238 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 162 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 334 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 142 bp overlap