chr2 : 118,183,275 118,183,878
603 bp 28 TFs 1 linked gene
This 603 bp open chromatin element is linked to THORLNC and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
THORLNC 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:118,178,275 – 118,188,878
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 78 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 260 bp overlap
FOXA1 6 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 219 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 342 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 345 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 369 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 214 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 451 bp overlap
ChIP DE DE-FOXA2-2 485 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 359 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 522 bp overlap
ChIP DE DE-GATA4-2 603 bp overlap
ChIP foregut GSE117136.GATA4.foregut 359 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 603 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 533 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 564 bp overlap
ChIP DE DE-GATA6-2 579 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 584 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 493 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 562 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 484 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 603 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 603 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 572 bp overlap
ChIP foregut GSE117136.GATA6.foregut 464 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 546 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 520 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 470 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 73 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 242 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 145 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 274 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 269 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 370 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 265 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 201 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 398 bp overlap
PDX1 7 datasets
ChIP H9 ERP004206.PDX1.H9 107 bp overlap
ChIP hESC GSE58685.PDX1.hESC 105 bp overlap
ChIP hESC GSE58685.PDX1.hESC 251 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 510 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 508 bp overlap
ChIP islet ERP001456.PDX1.islet 121 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 603 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 100 bp overlap
RARA 3 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 179 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 199 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 376 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 267 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 322 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 333 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 406 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 598 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 401 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 353 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 321 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 467 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 326 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 252 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 415 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 321 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 114 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 369 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 531 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 182 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 160 bp overlap