chr2 : 104,438,558 104,438,886
328 bp 16 TFs 1 linked gene
This 328 bp open chromatin element is linked to LINC01102 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01102 4.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:104,433,558 – 104,443,886
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CRY2 1 dataset
ChIP U2OS_DMSO GSE130507.CRY2.U2OS_DMSO 129 bp overlap
CTCF 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 179 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 289 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 170 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 312 bp overlap
ChIP DE DE-FOXA2-2 295 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 222 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 328 bp overlap
ChIP DE DE-GATA4-2 328 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 328 bp overlap
ChIP DE DE-GATA6-2 328 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 288 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
KLF5 1 dataset
ChIP YCC-3 GSE51705.KLF5.YCC-3 160 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 225 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 328 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 292 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 243 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 297 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 291 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 222 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 161 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 233 bp overlap
ZNF274 2 datasets
ChIP NT2/D1 ENCFF960BHH 328 bp overlap
ChIP NT2/D1 ENCFF960BHH 233 bp overlap