chr2 : 96,539,488 96,539,838
350 bp 20 TFs 2 linked genes
This 350 bp open chromatin element is linked to ARID5A and ENSG00000235480 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ARID5A 2.7 kb Proximal Proximity
ENSG00000235480 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:96,534,488 – 96,544,838
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 164 bp overlap
BRD4 2 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 156 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 199 bp overlap
ESR1 1 dataset
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 103 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 295 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
GATA2 3 datasets
ChIP HUVEC-C GSE109625.GATA2.HUVEC-C 151 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 350 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 131 bp overlap
GATA3 4 datasets
ChIP Jurkat GSE29180.GATA3.Jurkat 206 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 139 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 221 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 220 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 328 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 196 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 59 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 255 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 200 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF412KAE 350 bp overlap
ChIP GM12878 ENCFF412KAE 350 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 288 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 153 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 320 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 295 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 80 bp overlap
SUZ12 1 dataset
ChIP NT2/D1 ENCFF574SXS 62 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 243 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 116 bp overlap