chr2 : 47,666,415 47,666,665
250 bp 23 TFs 0 linked genes
This 250 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:47,661,415 – 47,671,665
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 170 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 150 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 132 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
ESR1 50 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 250 bp overlap
ChIP MCF-7 GSE117492.ESR1.MCF-7 246 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 246 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 250 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 124 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 245 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 170 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 169 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 250 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 250 bp overlap
ChIP MCF-7_DMSO GSE148277.ESR1.MCF-7_DMSO 250 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 163 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 248 bp overlap
ChIP MCF-7_E2 GSE68356.ESR1.MCF-7_E2 150 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 235 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 192 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 135 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 211 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 136 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 208 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 193 bp overlap
ChIP MCF-7_E2-320min-ERalpha GSE94023.ESR1.MCF-7_E2-320min-ERalpha 179 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 198 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 196 bp overlap
ChIP MCF-7_E2-640min-ERalpha GSE94023.ESR1.MCF-7_E2-640min-ERalpha 178 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 170 bp overlap
ChIP MCF-7_E2_120M GSE54855.ESR1.MCF-7_E2_120M 150 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 143 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 136 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 152 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 124 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 128 bp overlap
ChIP MCF-7_SHFOXA1_E2_TNF GSE59530.ESR1.MCF-7_SHFOXA1_E2_TNF 114 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 164 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 184 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 212 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 240 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 199 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 195 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 175 bp overlap
ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 194 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 229 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 226 bp overlap
ChIP T-47D-B_E2 GSE80358.ESR1.T-47D-B_E2 174 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 180 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 243 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 163 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 168 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 186 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 205 bp overlap
ESR1_D538G 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_D538G.MCF-7_dox 173 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 231 bp overlap
ESR1_Y537N 3 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 143 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 250 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 250 bp overlap
ESR1_Y537S 5 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 205 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 250 bp overlap
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 92 bp overlap
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 196 bp overlap
ChIP T-47D_dox_E2 GSE94493.ESR1_Y537S.T-47D_dox_E2 204 bp overlap
FOXA1 2 datasets
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 175 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 239 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 250 bp overlap
ChIP DE DE-FOXA2-2 250 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 227 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 224 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 250 bp overlap
ChIP DE DE-GATA6-2 242 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 250 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 250 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 250 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 250 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 127 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 162 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 237 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 197 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 241 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 197 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 196 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 164 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 155 bp overlap