chrX : 49,925,245 49,925,418
173 bp 14 TFs 1 linked gene
This 173 bp open chromatin element is linked to CLCN5 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CLCN5 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:49,920,245 – 49,930,418
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 155 bp overlap
ChIP K562 ENCFF574LOW 173 bp overlap
EGR1 3 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 138 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 164 bp overlap
ChIP K562 ENCFF006PJY 170 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 61 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 122 bp overlap
ChIP erythroblast ENCFF867JAR 173 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 173 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 164 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 156 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 173 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 106 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 158 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 114 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 146 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 173 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 63 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 164 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 128 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 173 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF331VPZ 173 bp overlap