Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 105 bp overlap

ARNTL 2 datasets

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 253 bp overlap

ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 205 bp overlap

BRD4 2 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 266 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 206 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 300 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 273 bp overlap

CTCF 4 datasets

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 168 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 305 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 305 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 305 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 215 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 259 bp overlap

ETV6 1 dataset

ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 248 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 305 bp overlap

ChIP DE DE-FOXA2-2 247 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 305 bp overlap

ChIP DE DE-GATA4-2 305 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 305 bp overlap

ChIP DE DE-GATA6-2 305 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 305 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 305 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 305 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 305 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 305 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 305 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 305 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 305 bp overlap

HIF1A 1 dataset

ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 269 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 305 bp overlap

MEF2D 1 dataset

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 226 bp overlap

MITF 1 dataset

ChIP 501-mel GSE137522.MITF.501-mel 278 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 305 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 301 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 305 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 305 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 305 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 305 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 234 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 174 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 259 bp overlap

Genome Browser