chr22 : 17,089,112 17,089,816
704 bp 16 TFs 7 linked genes
This 704 bp open chromatin element is linked to 7 target genes and is bound by 16 transcription factors.
Linked Genes
7 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
IL17RA 4.2 kb Proximal Proximity
ENSG00000290931 52.8 kb Distal Multiome
HDHD5 69.8 kb Distal Multiome
HDHD5-AS1 69.9 kb Distal Multiome
ADA2 110.2 kb Distal Multiome
CECR2 280.0 kb Distal Multiome
BID 685.1 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:17,084,112 – 17,094,816
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 270 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 231 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 689 bp overlap
ChIP DE DE-FOXA2-2 704 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 704 bp overlap
ChIP DE DE-GATA4-2 698 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 660 bp overlap
ChIP DE DE-GATA6-2 657 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 294 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 515 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 567 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 575 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 622 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 502 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 273 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 358 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 251 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 330 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 704 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 488 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 361 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 296 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 552 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 290 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 704 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 657 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 350 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 368 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 552 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 587 bp overlap
TCF12 1 dataset
ChIP H1 ENCFF203EBH 251 bp overlap