chr21 : 36,959,406 36,959,781
375 bp 24 TFs 2 linked genes
This 375 bp open chromatin element is linked to HLCS-AS1 and HLCS and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HLCS-AS1 6.7 kb Proximal Proximity
HLCS 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:36,954,406 – 36,964,781
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 238 bp overlap
CTCF 1 dataset
ChIP MM1-S GSE43743.CTCF.MM1-S 94 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 178 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 146 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 180 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 149 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 177 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 211 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 143 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 152 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 206 bp overlap
NELFE 1 dataset
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 155 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 76 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 129 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 185 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 202 bp overlap
ChIP H1 ENCFF833NJP 239 bp overlap
ChIP H54 ENCFF398BXN 165 bp overlap
RBFOX2 5 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 218 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 187 bp overlap
ChIP K562 ENCFF196WTG 71 bp overlap
ChIP K562 ENCFF967GRF 66 bp overlap
ChIP K562 ENCFF967GRF 66 bp overlap
RUNX1 1 dataset
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 156 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 108 bp overlap
ChIP WTC11 ENCFF688PEU 320 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 99 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 138 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 321 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 302 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 186 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 66 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 148 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 173 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 205 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 126 bp overlap