chr20 : 44,522,935 44,523,165
230 bp 24 TFs 2 linked genes
This 230 bp open chromatin element is linked to SERINC3 and PKIG and is bound by 24 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
SERINC3 881 bp At TSS Proximity
PKIG 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:44,517,935 – 44,528,165
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 128 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 230 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 125 bp overlap
EZH2 1 dataset
ChIP OCI-Ly7 GSE45982.EZH2.OCI-Ly7 160 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 230 bp overlap
ChIP DE DE-FOXA2-2 230 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 230 bp overlap
ChIP DE DE-GATA4-2 230 bp overlap
ChIP foregut GSE117136.GATA4.foregut 230 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 230 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 175 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 118 bp overlap
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 230 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 230 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 230 bp overlap
ChIP foregut GSE117136.GATA6.foregut 230 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 230 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 230 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 230 bp overlap
HOXA7 1 dataset
ChIP A549 ENCFF746ZBJ 51 bp overlap
HOXA9 1 dataset
ChIP SEM GSE38339.HOXA9.SEM 128 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 228 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 230 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 230 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 123 bp overlap
NAIF1 1 dataset
ChIP HepG2 ENCFF291NIS 180 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 70 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 189 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 230 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 230 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 230 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 230 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 230 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 230 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 230 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 183 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 230 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 199 bp overlap
TOE1 1 dataset
ChIP HepG2 ENCFF776YJH 167 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
ZC3H8 1 dataset
ChIP HepG2 ENCFF862NOM 230 bp overlap
ZNF778 1 dataset
ChIP HepG2 ENCFF967DPC 224 bp overlap