chr19 : 38,753,783 38,754,151
368 bp 21 TFs 1 linked gene
This 368 bp open chromatin element is linked to CAPN12 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CAPN12 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:38,748,783 – 38,759,151
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K562 ENCFF938UXQ 368 bp overlap
ChIP K562 ENCFF938UXQ 247 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 368 bp overlap
ChIP DE DE-FOXA2-2 368 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCFF867JAR 240 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 368 bp overlap
ChIP DE DE-GATA4-2 368 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 368 bp overlap
ChIP DE DE-GATA6-2 368 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 368 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 303 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 368 bp overlap
HMBOX1 1 dataset
ChIP K562 ENCFF055GAZ 286 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF348IBL 147 bp overlap
ChIP K562 ENCFF771OHZ 368 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 322 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 81 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 215 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 368 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 302 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 358 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 368 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 368 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 366 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 368 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 368 bp overlap
ZNF24 4 datasets
ChIP K562 ENCFF497GLV 368 bp overlap
ChIP K562 ENCFF615YYW 166 bp overlap
ChIP K562 ENCFF877JCX 368 bp overlap
ChIP K562 ENCFF877JCX 197 bp overlap
ZNF316 2 datasets
ChIP K562 ENCFF281INV 66 bp overlap
ChIP K562 ENCFF838QCD 76 bp overlap
ZNF592 2 datasets
ChIP K562 ENCFF547OSS 363 bp overlap
ChIP K562 ENCFF547OSS 111 bp overlap
ZSCAN29 1 dataset
ChIP K562 ENCFF797SOU 61 bp overlap