DE-5

DE-5.4

Submodule 23 genes

Apoptosis regulation and extracellular matrix remodeling

This 23-gene module includes BCL2L1, EFNB2, WWC1, ADAMTS1, and PNPT1, with enriched terms related to apoptosis regulation and extracellular matrix remodeling. Knockdown of PSMA1 and MYNN represses this module, suggesting these factors support its expression during endoderm differentiation.

Notable genes: BCL2L1 EFNB2 WWC1 ADAMTS1 PNPT1 CALD1 NNT UBASH3B Top TFs: PSMA1 MYNN

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (22)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z