DE-5

DE-5.19

Submodule 13 genes

Protein modification and ubiquitin-mediated degradation

This module contains 13 genes including SEC14L2, RNF170, FBXO16, PHYKPL, and TTC23, with top enrichment in ubiquitin-mediated proteolysis and protein modification pathways. Knockdown of FOXA2 activates this module, while knockdown of SOX17 and EOMES represses it.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (12)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z