DE-5

DE-5.13

Submodule 14 genes

Golgi apparatus and transcriptional regulation

This 14-gene module includes highly studied genes GOLPH3, TEAD4, MAML1, PRPF4B, and LUC7L3, with enriched terms related to Golgi apparatus organization and transcriptional coactivator activity. Knockdown of ZIC3 represses this module, suggesting ZIC3 normally supports its expression during endoderm differentiation.

Notable genes: GOLPH3 TEAD4 MAML1 PRPF4B LUC7L3 TEX10 FAM107B REEP3 Top TFs: ZIC3

TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (13)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z