DE-3

DE-3.8

Submodule 26 genes

Cytoskeletal and membrane trafficking regulation

This 26-gene module includes PAK1, CNNM2, ARFGEF2, SCAI, and TRAK1, with enriched terms related to cytoskeleton organization, membrane trafficking, and protein transport. Knockdown of ARID1A, SMAD3, and MIXL1 activates this module. Knockdown of DR1, HES1, and SOX11 represses this module.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (23)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z