DE-2

DE-2.1

Submodule 84 genes

mRNA stability and stress granule regulation

This 84-gene module includes EP300, FBXW7, and CREBBP, with enrichment in mRNA catabolic processes, mRNA and RNA stability regulation, cytoplasmic stress granules, and histone modifying activity. Knockdown of SOX17, ZC3H3, and TCEB3 represses this module.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (84)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z