DE-1

DE-1.13

Submodule 25 genes

Protein degradation and trafficking pathways

This module contains 25 genes including STUB1, RHOC, CD99, BCAP31, and CAPNS1, enriched for protein ubiquitination, endocytosis, and membrane trafficking functions. Knockdown of KLF6 activates this module. Knockdown of SOX4, SOX11, and LIN28A represses this module.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (25)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z