chr18 : 7,573,842 7,574,154
312 bp 21 TFs 1 linked gene
This 312 bp open chromatin element is linked to PTPRM and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTPRM 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:7,568,842 – 7,579,154
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 134 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 176 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 249 bp overlap
ChIP DE DE-FOXA2-2 285 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 312 bp overlap
ChIP DE DE-GATA4-2 312 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 312 bp overlap
ChIP DE DE-GATA6-2 312 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 257 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 257 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF103PKS 312 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 241 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 175 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 250 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 246 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 253 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 210 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 265 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 299 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 312 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 312 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 312 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 274 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 312 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 306 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 312 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 287 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 302 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 286 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 312 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 120 bp overlap
ZFP64 2 datasets
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 304 bp overlap
ChIP HepG2 ENCFF873EPM 312 bp overlap