chr17 : 73,351,620 73,352,260
640 bp 17 TFs 6 linked genes
This 640 bp open chromatin element is linked to 6 target genes and is bound by 17 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
CDC42EP4 39.9 kb Distal Multiome
C17orf80 119.5 kb Distal Multiome
COG1 158.9 kb Distal Multiome
SSTR2 186.9 kb Distal Multiome
SLC39A11 259.3 kb Distal Multiome
SDK2 292.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:73,346,620 – 73,357,260
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 186 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 76 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 640 bp overlap
ChIP foregut GSE117136.GATA4.foregut 549 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 457 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 456 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 547 bp overlap
ChIP DE DE-GATA6-2 615 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 513 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 596 bp overlap
ChIP foregut GSE117136.GATA6.foregut 595 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 540 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 351 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 455 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 353 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 199 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 213 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 249 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 186 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 219 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 639 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 430 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 448 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 448 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 640 bp overlap
STAT1 1 dataset
ChIP SET-2_cortistatin-A GSE100566.STAT1.SET-2_cortistatin-A 218 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 188 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 167 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 227 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 233 bp overlap