chr15 : 99,735,140 99,735,631
491 bp 13 TFs 1 linked gene
This 491 bp open chromatin element is linked to LYSMD4 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LYSMD4 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:99,730,140 – 99,740,631
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
ATF2 3 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF955VER 168 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 127 bp overlap
ATF7 2 datasets
ChIP HepG2 ENCFF470FKK 246 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 161 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 311 bp overlap
ChIP K562 ENCFF574LOW 370 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 130 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 377 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 86 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 142 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 322 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 213 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 246 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 168 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 410 bp overlap
GATA3 8 datasets
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 138 bp overlap
ChIP MCF-7 ENCFF352QVM 398 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 282 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 257 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 254 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 274 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 221 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 294 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 312 bp overlap
ChIP DE DE-GATA4-1 491 bp overlap
ChIP DE DE-GATA4-2 491 bp overlap
ChIP foregut GSE117136.GATA4.foregut 411 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 491 bp overlap
ChIP DE DE-GATA6-2 491 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 351 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 280 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 374 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 159 bp overlap
YBX1 1 dataset
ChIP HEL GSE146717.YBX1.HEL 425 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 216 bp overlap