chr15 : 99,734,510 99,735,017
507 bp 19 TFs 1 linked gene
This 507 bp open chromatin element is linked to LYSMD4 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LYSMD4 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:99,729,510 – 99,740,017
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 141 bp overlap
BRD4 1 dataset
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 232 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 248 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 188 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2-320min-ERalpha GSE94023.ESR1.MCF-7_E2-320min-ERalpha 185 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 175 bp overlap
FOXA1 17 datasets
ChIP MCF-7 ENCFF465LTH 384 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 339 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 323 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 241 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 193 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 167 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 197 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 232 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 154 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 202 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 182 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 208 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 225 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 226 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 204 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 205 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 345 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 507 bp overlap
ChIP DE DE-FOXA2-2 465 bp overlap
GATA3 4 datasets
ChIP MCF-7 ENCFF352QVM 365 bp overlap
ChIP MCF-7 ENCFF437NQS 348 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 216 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 160 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 507 bp overlap
ChIP DE DE-GATA4-2 507 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 485 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 507 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 295 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 395 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 468 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 220 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 459 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 155 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 195 bp overlap