chr15 : 92,642,396 92,642,701
305 bp 15 TFs 0 linked genes
This 305 bp open chromatin element has no linked target genes and is bound by 15 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:92,637,396 – 92,647,701
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 132 bp overlap
CTCF 44 datasets
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 93 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 146 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 106 bp overlap
ChIP GM10266 ENCFF241YYF 172 bp overlap
ChIP GM10266 ENCFF892KUY 171 bp overlap
ChIP GM12872 ENCFF697BYI 176 bp overlap
ChIP GM12873 ENCFF711LOS 227 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 265 bp overlap
ChIP GM23338 ENCFF531QOI 265 bp overlap
ChIP GM23338 ENCFF772DML 172 bp overlap
ChIP H9 ENCFF152GTF 305 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 118 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 159 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 176 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 166 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 167 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 240 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 241 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 206 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 110 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 82 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 137 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 143 bp overlap
ChIP MCF-7 ENCFF139NQI 195 bp overlap
ChIP MCF-7 ENCFF198DQX 186 bp overlap
ChIP MCF-7 ENCFF494VXA 162 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 305 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 276 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 139 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 144 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 208 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 125 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 174 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 213 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 196 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 193 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 224 bp overlap
ChIP VCaP ENCFF858YQT 305 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 209 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 94 bp overlap
ChIP endodermal cell ENCFF471YCZ 305 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 168 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 148 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 255 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 239 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 290 bp overlap
ChIP DE DE-GATA4-2 305 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 305 bp overlap
ChIP DE DE-GATA6-2 305 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 305 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 260 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 305 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 305 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 157 bp overlap
RAD21 2 datasets
ChIP GM12878 ENCFF101UQZ 120 bp overlap
ChIP MCF-7 ENCFF694KOM 253 bp overlap
RELA 2 datasets
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 172 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 175 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 305 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 305 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 305 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 305 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 305 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 305 bp overlap
YY1 1 dataset
ChIP GM12878 ENCFF908JTL 233 bp overlap
ZBTB33 2 datasets
ChIP GM12878 ENCFF818EFA 189 bp overlap
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 201 bp overlap
ZNF140 1 dataset
ChIP HEK293 ENCFF501RUF 81 bp overlap