chr13 : 96,992,554 96,992,979
425 bp 20 TFs 2 linked genes
This 425 bp open chromatin element is linked to OXGR1 and LINC00359 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
OXGR1 1.4 kb Proximal Proximity
LINC00359 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:96,987,554 – 96,997,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 343 bp overlap
AR 20 datasets
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 89 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 77 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 123 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 191 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 425 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 115 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 58 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 68 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 88 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 202 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 64 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 109 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 57 bp overlap
ChIP prostate GSE65478.AR.prostate 130 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 126 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 89 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 128 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 166 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 303 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 70 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 416 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 349 bp overlap
FOXA1 11 datasets
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 62 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 77 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 136 bp overlap
ChIP primary-prostate-cancer_P1_DSG GSE114737.FOXA1.primary-prostate-cancer_P1_DSG 67 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 334 bp overlap
ChIP primary-prostate-cancer_P3_DSG GSE114737.FOXA1.primary-prostate-cancer_P3_DSG 74 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 147 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 94 bp overlap
ChIP prostate_P19_T GSE130408.FOXA1.prostate_P19_T 72 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 107 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 99 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 425 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 425 bp overlap
ChIP DE DE-GATA4-2 425 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 425 bp overlap
ChIP DE DE-GATA6-2 425 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 268 bp overlap
HOXB13 1 dataset
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 98 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 304 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 180 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 343 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 405 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 403 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 382 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 277 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 300 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 187 bp overlap