Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

24 transcription factors

ARID1A 2 datasets

ChIP RMG-I GSE120058.ARID1A.RMG-I 305 bp overlap

ChIP RMG-I GSE104545.ARID1A.RMG-I 267 bp overlap

BRD4 1 dataset

ChIP CHL-1 GSE95585.BRD4.CHL-1 345 bp overlap

CTCFL 1 dataset

Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF896HSY 99 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 184 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 243 bp overlap

ChIP DE DE-GATA6-2 353 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 294 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 328 bp overlap

Hand1 1 dataset

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 292 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 669 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 701 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 352 bp overlap

KDM5B 2 datasets

ChIP HCC2157 GSE46055.KDM5B.HCC2157 171 bp overlap

ChIP HCC2157 GSE46055.KDM5B.HCC2157 157 bp overlap

NCAPH2 2 datasets

ChIP RMG-I GSE120058.NCAPH2.RMG-I 235 bp overlap

ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 698 bp overlap

NFE2L2 1 dataset

ChIP A-549 GSE113497.NFE2L2.A-549 244 bp overlap

NFIB 1 dataset

ChIP MCF-7 ENCFF925CGH 199 bp overlap

PATZ1 1 dataset

Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 473 bp overlap

PPARA::RXRA 1 dataset

Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

SMAD2 2 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 273 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 661 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 583 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 487 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 428 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 560 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 643 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 722 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 707 bp overlap

SMAD3 3 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 155 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 174 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 357 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 304 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 456 bp overlap

ZNF320 1 dataset

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

Genome Browser