chr13 : 24,591,684 24,592,420
736 bp 20 TFs 2 linked genes
This 736 bp open chromatin element is linked to PARP4 and ATP12A and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PARP4 79.2 kb Distal Multiome
ATP12A 88.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:24,586,684 – 24,597,420
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 219 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 441 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 107 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 131 bp overlap
ChIP MCF-7 ENCFF465LTH 225 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 736 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 736 bp overlap
ChIP DE DE-GATA4-2 736 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 736 bp overlap
ChIP DE DE-GATA6-2 736 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 736 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 736 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 736 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 638 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 324 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 520 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 736 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 352 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 736 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 420 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 335 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCFF658MHR 316 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 240 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 718 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 236 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 736 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 525 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 444 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 736 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 736 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 736 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 736 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 694 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 138 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 176 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 522 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 237 bp overlap
ZNF513 1 dataset
ChIP HEK293 ENCFF457TCC 405 bp overlap