chr12 : 118,520,842 118,521,879
1,037 bp 16 TFs 2 linked genes
This 1.0 kb open chromatin element is linked to SUDS3 and TAOK3 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SUDS3 144.9 kb Distal Multiome
TAOK3 148.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:118,515,842 – 118,526,879
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 173 bp overlap
BRD4 2 datasets
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 173 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 306 bp overlap
ChIP BLaER1 ENCFF274GAT 282 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
ESRRA 1 dataset
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 118 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 350 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 198 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 239 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 119 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 979 bp overlap
ChIP DE DE-FOXA2-2 927 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 463 bp overlap
ChIP DE DE-GATA4-2 990 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 819 bp overlap
ChIP DE DE-GATA6-2 1037 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 461 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1037 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 481 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 324 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 331 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 241 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1034 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 518 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 340 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 356 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 297 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1034 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1037 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 233 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 755 bp overlap