chr12 : 87,789,556 87,789,980
424 bp 21 TFs 0 linked genes
This 424 bp open chromatin element has no linked target genes and is bound by 21 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:87,784,556 – 87,794,980
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 424 bp overlap
FOXA1 2 datasets
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 141 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 424 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 241 bp overlap
ChIP DE DE-FOXA2-1 424 bp overlap
ChIP DE DE-FOXA2-2 424 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 424 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 297 bp overlap
GATA1 2 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 130 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 203 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 424 bp overlap
ChIP DE DE-GATA4-2 424 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 214 bp overlap
ChIP foregut GSE117136.GATA4.foregut 342 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 424 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 424 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 424 bp overlap
ChIP DE DE-GATA6-2 424 bp overlap
ChIP H9 ERP004206.GATA6.H9 299 bp overlap
ChIP foregut GSE117136.GATA6.foregut 349 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 412 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 424 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 424 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 366 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 348 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 424 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 412 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 159 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 193 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 310 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 209 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 303 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 218 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 178 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 150 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 235 bp overlap
STAT3 4 datasets
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 159 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 161 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 95 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 190 bp overlap
TAL1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 230 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 173 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 215 bp overlap