chr12 : 27,249,563 27,250,058
495 bp 15 TFs 1 linked gene
This 495 bp open chromatin element is linked to STK38L and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
STK38L 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:27,244,563 – 27,255,058
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 138 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 143 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 480 bp overlap
ChIP DE DE-FOXA2-2 459 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 464 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 406 bp overlap
ChIP DE DE-GATA6-2 454 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 373 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 299 bp overlap
ChIP GM12878 ENCFF753XDO 495 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 237 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 421 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 356 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 402 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 138 bp overlap
YY1 1 dataset
ChIP GM12878 ENCFF150EFU 222 bp overlap