chr11 : 111,592,552 111,592,865
313 bp 20 TFs 1 linked gene
This 313 bp open chromatin element is linked to SIK2 and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SIK2 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:111,587,552 – 111,597,865
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 172 bp overlap
CTCF 1 dataset
ChIP Panc1 ENCFF056JQX 313 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 295 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 141 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 289 bp overlap
FOXA1 2 datasets
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 193 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 160 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 313 bp overlap
ChIP DE DE-FOXA2-2 313 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 236 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 191 bp overlap
GATA3 4 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 272 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 202 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 206 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 189 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 192 bp overlap
ChIP DE DE-GATA4-1 313 bp overlap
ChIP DE DE-GATA4-2 313 bp overlap
ChIP foregut GSE117136.GATA4.foregut 313 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 246 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 313 bp overlap
ChIP DE DE-GATA6-2 313 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 313 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 313 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 313 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 313 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 313 bp overlap
ChIP foregut GSE117136.GATA6.foregut 313 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 313 bp overlap
RUNX1 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 97 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 313 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 313 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 313 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 158 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 160 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 240 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 286 bp overlap